Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRAF3IP2	HGNC:1343 (HGNC) 10758 (Entrez Gene) 607043 (OMIM) TRAF3IP2 (Alliance of Genome Resources)	Chr6 q21	Chr6:111555381-111606906 (-) GRCh38	chronic mucocutaneous candidiasis psoriasis 13	O43734 (UniProt | EBI) NM_147686 (RefSeq)
mouse	Traf3ip2	MGI:2143599 (MGI) 103213 (Entrez Gene) Gene Tree Traf3ip2 (Alliance of Genome Resources)	Chr10 20.86 cM	Chr10:39488930-39531303 (+) GRCm39	atopic dermatitis Sjogren's syndrome systemic lupus erythematosus	103213 (NCBI Gene Model) Q8N7N6 (UniProt | EBI) NM_134000 (RefSeq)
rat	Traf3ip2	RGD:1593240 (Rat Genome Database) 361857 (Entrez Gene) Traf3ip2 (Alliance of Genome Resources)	Chr20 q12			NP_001037713 (RefSeq) NM_001044248 (RefSeq)
zebrafish	traf3ip2a	ZDB-GENE-050809-60 (Zebrafish Model Organism Database) 606616 (Entrez Gene) traf3ip2a (Alliance of Genome Resources)	Chr20			XP_005173859 (RefSeq)
	traf3ip2b	ZDB-GENE-031118-74 (Zebrafish Model Organism Database) 386940 (Entrez Gene) traf3ip2b (Alliance of Genome Resources)	Chr11			XP_021335592 (RefSeq)
	traf3ip2l	ZDB-GENE-110919-1 (Zebrafish Model Organism Database) 100334940 (Entrez Gene) traf3ip2l (Alliance of Genome Resources)	Chr6			XP_002662532 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.