Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRDM7	HGNC:9351 (HGNC) 11105 (Entrez Gene) 609759 (OMIM) PRDM7 (Alliance of Genome Resources)	Chr16 q24.3	Chr16:90056566-90092072 (-) GRCh38		Q9NQW5 (UniProt | EBI) NM_001098173 (RefSeq)
	PRDM9	HGNC:13994 (HGNC) 56979 (Entrez Gene) 609760 (OMIM) PRDM9 (Alliance of Genome Resources)	Chr5 p14.2	Chr5:23443586-23528093 (+) GRCh38		Q9NQV7 (UniProt | EBI) NM_020227 (RefSeq)
mouse	Prdm9	MGI:2384854 (MGI) 213389 (Entrez Gene) Gene Tree Prdm9 (Alliance of Genome Resources)	Chr17 8.95 cM	Chr17:15763341-15784616 (-) GRCm39		ENSMUSG00000051977 (Ensembl Gene Model) ENSMUSP00000156841 (Ensembl) ENSMUST00000233295 (Ensembl)
rat	Prdm9	RGD:1305247 (Rat Genome Database) 365155 (Entrez Gene) Prdm9 (Alliance of Genome Resources)	Chr1 q12			P0C6Y7 (UniProt | EBI) NM_001108903 (RefSeq)
zebrafish	prdm9	ZDB-GENE-040426-1319 (Zebrafish Model Organism Database) 393876 (Entrez Gene) prdm9 (Alliance of Genome Resources)	Chr12			Q6P2A1 (UniProt | EBI) NM_200902 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.