Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TFDP1	HGNC:11749 (HGNC) 7027 (Entrez Gene) 189902 (OMIM) TFDP1 (Alliance of Genome Resources)	Chr13 q34	Chr13:113584688-113641473 (+) GRCh38	mismatch repair cancer syndrome	Q14186 (UniProt | EBI) NM_007111 (RefSeq)
	TFDP3	HGNC:24603 (HGNC) 51270 (Entrez Gene) 300772 (OMIM) TFDP3 (Alliance of Genome Resources)	ChrX q26.2	ChrX:133216662-133218354 (-) GRCh38		Q5H9I0 (UniProt | EBI) NM_016521 (RefSeq)
mouse	Tfdp1	MGI:101934 (MGI) 21781 (Entrez Gene) Gene Tree Tfdp1 (Alliance of Genome Resources)	Chr8 5.78 cM	Chr8:13388751-13428448 (+) GRCm39		ENSMUSG00000038482 (Ensembl Gene Model) ENSMUSP00000147881 (Ensembl) ENSMUST00000209885 (Ensembl)
rat	Tfdp1	RGD:1560344 (Rat Genome Database) 361178 (Entrez Gene) Tfdp1 (Alliance of Genome Resources)	Chr16 q12.5			NP_001020889 (RefSeq) NM_001025718 (RefSeq)
zebrafish	tfdp1a	ZDB-GENE-040426-2883 (Zebrafish Model Organism Database) 406813 (Entrez Gene) tfdp1a (Alliance of Genome Resources)	Chr9			NP_998657 (RefSeq) NM_213492 (RefSeq)
	tfdp1b	ZDB-GENE-040426-1746 (Zebrafish Model Organism Database) 393749 (Entrez Gene) tfdp1b (Alliance of Genome Resources)	Chr1			NP_957070 (RefSeq) NM_200776 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.