Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RPP40	HGNC:20992 (HGNC) 10799 (Entrez Gene) 606117 (OMIM) RPP40 (Alliance of Genome Resources)	Chr6 p25.1	Chr6:4988426-5004063 (-) GRCh38		O75818 (UniProt | EBI) NM_006638 (RefSeq)
mouse	Rpp40	MGI:1346084 (MGI) 208366 (Entrez Gene) Gene Tree Rpp40 (Alliance of Genome Resources)	Chr13 14.44 cM	Chr13:36077455-36090342 (-) GRCm39		ENSMUSG00000021418 (Ensembl Gene Model) ENSMUSP00000130290 (Ensembl) ENSMUST00000171686 (Ensembl)
rat	Rpp40	RGD:1310228 (Rat Genome Database) 291071 (Entrez Gene) Rpp40 (Alliance of Genome Resources)	Chr17 p12			Q5BK64 (UniProt | EBI) NM_001399354 (RefSeq)
zebrafish	rpp40	ZDB-GENE-040625-161 (Zebrafish Model Organism Database) 415238 (Entrez Gene) rpp40 (Alliance of Genome Resources)	Chr2			NP_001002148 (RefSeq) NM_001002148 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.