Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RPF1	HGNC:30350 (HGNC) 80135 (Entrez Gene) RPF1 (Alliance of Genome Resources)	Chr1 p22.3	Chr1:84479259-84498352 (+) GRCh38		Q9H9Y2 (UniProt | EBI) NM_025065 (RefSeq)
mouse	Rpf1	MGI:1917535 (MGI) 70285 (Entrez Gene) Gene Tree Rpf1 (Alliance of Genome Resources)	Chr3 71.57 cM	Chr3:146212099-146227184 (-) GRCm39		70285 (NCBI Gene Model) Q7TND5 (UniProt | EBI) NM_027332 (RefSeq)
rat	Rpf1	RGD:1559755 (Rat Genome Database) 499725 (Entrez Gene) Rpf1 (Alliance of Genome Resources)	Chr2 q44			Q5RJS9 (UniProt | EBI) NM_001100794 (RefSeq)
zebrafish	rpf1	ZDB-GENE-040625-177 (Zebrafish Model Organism Database) 415250 (Entrez Gene) rpf1 (Alliance of Genome Resources)	Chr11			Q6IQU6 (UniProt | EBI) NM_001244839 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.