Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRPF38A	HGNC:25930 (HGNC) 84950 (Entrez Gene) 617031 (OMIM) PRPF38A (Alliance of Genome Resources)	Chr1 p32.3	Chr1:52404602-52420836 (+) GRCh38		Q8NAV1 (UniProt | EBI) NM_032284 (RefSeq)
mouse	Prpf38a	MGI:1916962 (MGI) 230596 (Entrez Gene) Gene Tree Prpf38a (Alliance of Genome Resources)	Chr4 50.64 cM	Chr4:108422064-108436533 (-) GRCm39		230596 (NCBI Gene Model) Q4FK66 (UniProt | EBI) NM_172697 (RefSeq)
rat	Prpf38a	RGD:1311129 (Rat Genome Database) 298374 (Entrez Gene) Prpf38a (Alliance of Genome Resources)	Chr5 q34			NP_001100142 (RefSeq) NM_001106672 (RefSeq)
zebrafish	prpf38a	ZDB-GENE-040801-225 (Zebrafish Model Organism Database) 445089 (Entrez Gene) prpf38a (Alliance of Genome Resources)	Chr6			Q6DHU4 (UniProt | EBI) NM_001003483 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.