Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRPC5	HGNC:12337 (HGNC) 7224 (Entrez Gene) 300334 (OMIM) TRPC5 (Alliance of Genome Resources)	ChrX q23	ChrX:111768011-112082776 (-) GRCh38		Q9UL62 (UniProt | EBI) NM_012471 (RefSeq)
mouse	Trpc5	MGI:109524 (MGI) 22067 (Entrez Gene) Gene Tree Trpc5 (Alliance of Genome Resources)	ChrX 65.49 cM	ChrX:143164667-143471176 (-) GRCm39		ENSMUSG00000041710 (Ensembl Gene Model) ENSMUSP00000049063 (Ensembl) ENSMUST00000040184 (Ensembl)
rat	Trpc5	RGD:619787 (Rat Genome Database) 140933 (Entrez Gene) Trpc5 (Alliance of Genome Resources)	ChrX q34			NP_543174 (RefSeq) NM_080898 (RefSeq)
zebrafish	trpc5a	ZDB-GENE-040812-1 (Zebrafish Model Organism Database) 557456 (Entrez Gene) trpc5a (Alliance of Genome Resources)	Chr1			NP_001038292 (RefSeq) NM_001327747 (RefSeq)
	trpc5b	ZDB-GENE-091112-24 (Zebrafish Model Organism Database) 559586 (Entrez Gene) trpc5b (Alliance of Genome Resources)	Chr21

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.