Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CDH5	HGNC:1764 (HGNC) 1003 (Entrez Gene) 601120 (OMIM) CDH5 (Alliance of Genome Resources)	Chr16 q21	Chr16:66366690-66404784 (+) GRCh38		P33151 (UniProt | EBI) NM_001114117 (RefSeq)
mouse	Cdh5	MGI:105057 (MGI) 12562 (Entrez Gene) Gene Tree Cdh5 (Alliance of Genome Resources)	Chr8 53.04 cM	Chr8:104828257-104871143 (+) GRCm39	exudative vitreoretinopathy	ENSMUSG00000031871 (Ensembl Gene Model) ENSMUSP00000034339 (Ensembl) ENSMUST00000034339 (Ensembl)
rat	Cdh5	RGD:1307370 (Rat Genome Database) 307618 (Entrez Gene) Cdh5 (Alliance of Genome Resources)	Chr19 p14			NP_001100877 (RefSeq) NM_001107407 (RefSeq)
zebrafish	cdh5	ZDB-GENE-040816-1 (Zebrafish Model Organism Database) 445471 (Entrez Gene) cdh5 (Alliance of Genome Resources)	Chr7			NP_001003983 (RefSeq) NM_001003983 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.