Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LCMT1	HGNC:17557 (HGNC) 51451 (Entrez Gene) 610286 (OMIM) LCMT1 (Alliance of Genome Resources)	Chr16 p12.1	Chr16:25111731-25178231 (+) GRCh38		Q9UIC8 (UniProt | EBI) NM_016015 (RefSeq)
mouse	Lcmt1	MGI:1353593 (MGI) 30949 (Entrez Gene) Gene Tree Lcmt1 (Alliance of Genome Resources)	Chr7 67.42 cM	Chr7:122977026-123029581 (+) GRCm39		30949 (NCBI Gene Model) NP_079580 (RefSeq) NM_025304 (RefSeq)
rat	Lcmt1	RGD:735118 (Rat Genome Database) 361643 (Entrez Gene) Lcmt1 (Alliance of Genome Resources)	Chr1 q36			Q6P4Z6 (UniProt | EBI) NM_199405 (RefSeq)
zebrafish	lcmt1	ZDB-GENE-040912-75 (Zebrafish Model Organism Database) 447907 (Entrez Gene) lcmt1 (Alliance of Genome Resources)	Chr12			NP_001004645 (RefSeq) NM_001004645 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.