Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCDC85A	HGNC:29400 (HGNC) 114800 (Entrez Gene) CCDC85A (Alliance of Genome Resources)	Chr2 p16.1	Chr2:56183852-56386174 (+) GRCh38		Q96PX6 (UniProt | EBI) NM_001348516 (RefSeq)
mouse	Ccdc85a	MGI:2445069 (MGI) 216613 (Entrez Gene) Gene Tree Ccdc85a (Alliance of Genome Resources)	Chr11 16.22 cM	Chr11:28335685-28534324 (-) GRCm39		ENSMUSG00000032878 (Ensembl Gene Model) ENSMUSP00000124972 (Ensembl) ENSMUST00000146385 (Ensembl)
rat	Ccdc85a	RGD:1311700 (Rat Genome Database) 289855 (Entrez Gene) Ccdc85a (Alliance of Genome Resources)	Chr14 q22			NP_001402043 (RefSeq) NM_001415114 (RefSeq)
zebrafish	ccdc85a	ZDB-GENE-080220-55 (Zebrafish Model Organism Database) 100141348 (Entrez Gene) ccdc85a (Alliance of Genome Resources)	Chr13			NP_001307120 (RefSeq) NM_001320191 (RefSeq)
	ccdc85al	ZDB-GENE-040912-92 (Zebrafish Model Organism Database) 447831 (Entrez Gene) ccdc85al (Alliance of Genome Resources)	Chr6			NP_001004570 (RefSeq) NM_001004570 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.