PCDHB1 Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	PCDHB1	HGNC:8680 (HGNC) 29930 (Entrez Gene) 606327 (OMIM) PCDHB1 (Alliance of Genome Resources)	Chr5 q31.3	Chr5:141051374-141059346 (+) GRCh38		Q9Y5F3 (UniProt \| EBI) NM_013340 (RefSeq)
mouse	Pcdhb1	MGI:2136730 (MGI) 93872 (Entrez Gene) Gene Tree Pcdhb1 (Alliance of Genome Resources)	Chr18 19.46 cM	Chr18:37397991-37400578 (+) GRCm39		ENSMUSG00000051663 (Ensembl Gene Model) ENSMUSP00000057519 (Ensembl) ENSMUST00000052366 (Ensembl)
rat	Pcdhb1	RGD:1308760 (Rat Genome Database) 364841 (Entrez Gene) Pcdhb1 (Alliance of Genome Resources)	Chr18 p11			NP_001014800 (RefSeq) NM_001014800 (RefSeq)
zebrafish	pcdh1g1	ZDB-GENE-050608-1 (Zebrafish Model Organism Database) 553983 (Entrez Gene) pcdh1g1 (Alliance of Genome Resources)	Chr10			NP_001018640 (RefSeq) NM_001020804 (RefSeq)
	pcdh1g2	ZDB-GENE-050608-2 (Zebrafish Model Organism Database) 553986 (Entrez Gene) pcdh1g2 (Alliance of Genome Resources)	Chr10			NP_001018872 (RefSeq) NM_001023578 (RefSeq)
	pcdh1g3	ZDB-GENE-050608-3 (Zebrafish Model Organism Database) 553987 (Entrez Gene) pcdh1g3 (Alliance of Genome Resources)	Chr10			NP_001018871 (RefSeq) NM_001023577 (RefSeq)
	pcdh1g11	ZDB-GENE-050609-7 (Zebrafish Model Organism Database) 553999 (Entrez Gene) pcdh1g11 (Alliance of Genome Resources)	Chr10			NP_001019282 (RefSeq) NM_001024111 (RefSeq)
	pcdh1g13	ZDB-GENE-050609-8 (Zebrafish Model Organism Database) 554000 (Entrez Gene) pcdh1g13 (Alliance of Genome Resources)	Chr10			NM_001024112 (RefSeq)
	pcdh1g14	ZDB-GENE-050609-9 (Zebrafish Model Organism Database) 554001 (Entrez Gene) pcdh1g14 (Alliance of Genome Resources)	Chr10			NM_001024113 (RefSeq)
	pcdh1g18	ZDB-GENE-050609-13 (Zebrafish Model Organism Database) 554005 (Entrez Gene) pcdh1g18 (Alliance of Genome Resources)	Chr10			NP_001019288 (RefSeq) NM_001024117 (RefSeq)
	pcdh1gb2	ZDB-GENE-041118-19 (Zebrafish Model Organism Database) 503573 (Entrez Gene) pcdh1gb2 (Alliance of Genome Resources)	Chr10			NP_001012676 (RefSeq) NM_001012658 (RefSeq)
	pcdh1gb9	ZDB-GENE-041118-18 (Zebrafish Model Organism Database) 553940 (Entrez Gene) pcdh1gb9 (Alliance of Genome Resources)	Chr10			NP_001018614 (RefSeq) NM_001020778 (RefSeq)
	pcdh2g10	ZDB-GENE-050610-1 (Zebrafish Model Organism Database) 554058 (Entrez Gene) pcdh2g10 (Alliance of Genome Resources)	Chr14			NP_001019354 (RefSeq) NM_001024183 (RefSeq)
	pcdh2g17	ZDB-GENE-050610-7 (Zebrafish Model Organism Database) 554064 (Entrez Gene) pcdh2g17 (Alliance of Genome Resources)	Chr14			NP_001019360 (RefSeq) NM_001024189 (RefSeq)