Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CEACAM1	HGNC:1814 (HGNC) 634 (Entrez Gene) 109770 (OMIM) CEACAM1 (Alliance of Genome Resources)	Chr19 q13.2	Chr19:42507304-42561234 (-) GRCh38		P13688 (UniProt | EBI) NM_001712 (RefSeq)
	CEACAM5	HGNC:1817 (HGNC) 1048 (Entrez Gene) 114890 (OMIM) CEACAM5 (Alliance of Genome Resources)	Chr19 q13.2	Chr19:41708585-41730433 (+) GRCh38		P06731 (UniProt | EBI) NM_004363 (RefSeq)
	CEACAM6	HGNC:1818 (HGNC) 4680 (Entrez Gene) 163980 (OMIM) CEACAM6 (Alliance of Genome Resources)	Chr19 q13.2	Chr19:41750977-41772211 (+) GRCh38		P40199 (UniProt | EBI) NM_002483 (RefSeq)
	PSG1	HGNC:9514 (HGNC) 5669 (Entrez Gene) 176390 (OMIM) PSG1 (Alliance of Genome Resources)	Chr19 q13.2	Chr19:42866464-42879822 (-) GRCh38		P11464 (UniProt | EBI) NM_001184826 (RefSeq)
	PSG3	HGNC:9520 (HGNC) 5671 (Entrez Gene) 176392 (OMIM) PSG3 (Alliance of Genome Resources)	Chr19 q13.2	Chr19:42721638-42740481 (-) GRCh38		Q16557 (UniProt | EBI) NM_021016 (RefSeq)
	PSG4	HGNC:9521 (HGNC) 5672 (Entrez Gene) 176393 (OMIM) PSG4 (Alliance of Genome Resources)	Chr19 q13.31	Chr19:43192702-43207299 (-) GRCh38		Q00888 (UniProt | EBI) NM_002780 (RefSeq)
	PSG6	HGNC:9523 (HGNC) 5675 (Entrez Gene) 176395 (OMIM) PSG6 (Alliance of Genome Resources)	Chr19 q13.31	Chr19:42902086-42919563 (-) GRCh38		Q00889 (UniProt | EBI) NM_002782 (RefSeq)
	PSG7	HGNC:9524 (HGNC) 5676 (Entrez Gene) 176396 (OMIM) PSG7 (Alliance of Genome Resources)	Chr19 q13.31	Chr19:42924132-42937207 (-) GRCh38		Q13046 (UniProt | EBI) NM_001290042 (RefSeq)
	PSG8	HGNC:9525 (HGNC) 440533 (Entrez Gene) 176397 (OMIM) PSG8 (Alliance of Genome Resources)	Chr19 q13.2	Chr19:42752686-42765678 (-) GRCh38		Q9UQ74 (UniProt | EBI) NM_182707 (RefSeq)
	PSG9	HGNC:9526 (HGNC) 5678 (Entrez Gene) 176398 (OMIM) PSG9 (Alliance of Genome Resources)	Chr19 q13.31	Chr19:43211791-43269530 (-) GRCh38		Q00887 (UniProt | EBI) NM_001301707 (RefSeq)
mouse	Ceacam2	MGI:1347246 (MGI) 26367 (Entrez Gene) Gene Tree Ceacam2 (Alliance of Genome Resources)	Chr7 13.87 cM	Chr7:25215467-25239282 (-) GRCm39		ENSMUSG00000054385 (Ensembl Gene Model) ENSMUSP00000048118 (Ensembl) ENSMUST00000044547 (Ensembl)
rat	Ceacam1	RGD:67396 (Rat Genome Database) 81613 (Entrez Gene) Ceacam1 (Alliance of Genome Resources)	Chr1 q21			P16573 (UniProt | EBI) NM_001033860 (RefSeq)
zebrafish	si:ch211-213a13.1	ZDB-GENE-050208-471 (Zebrafish Model Organism Database) 100535646 (Entrez Gene) si:ch211-213a13.1 (Alliance of Genome Resources)	Chr22			XP_003201059 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.