Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SCFD2	HGNC:30676 (HGNC) 152579 (Entrez Gene) SCFD2 (Alliance of Genome Resources)	Chr4 q12	Chr4:52872982-53366066 (-) GRCh38		Q8WU76 (UniProt | EBI) NM_152540 (RefSeq)
mouse	Scfd2	MGI:2443446 (MGI) 212986 (Entrez Gene) Gene Tree Scfd2 (Alliance of Genome Resources)	Chr5 39.44 cM	Chr5:74365477-74692420 (-) GRCm39		ENSMUSG00000062110 (Ensembl Gene Model) ENSMUSP00000072636 (Ensembl) ENSMUST00000072857 (Ensembl)
rat	Scfd2	RGD:1562708 (Rat Genome Database) 498353 (Entrez Gene) Scfd2 (Alliance of Genome Resources)	Chr14 p11			NP_001017499 (RefSeq) NM_001017499 (RefSeq)
zebrafish	scfd2	ZDB-GENE-050320-143 (Zebrafish Model Organism Database) 792105 (Entrez Gene) scfd2 (Alliance of Genome Resources)	Chr20			NP_001013582 (RefSeq) NM_001013564 (RefSeq)
	si:ch73-249k16.4	ZDB-GENE-091204-157 (Zebrafish Model Organism Database) 101883348 (Entrez Gene) si:ch73-249k16.4 (Alliance of Genome Resources)	Chr20

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.