Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CLPTM1	HGNC:2087 (HGNC) 1209 (Entrez Gene) 604783 (OMIM) CLPTM1 (Alliance of Genome Resources)	Chr19 q13.32	Chr19:44954585-44993341 (+) GRCh38		O96005 (UniProt | EBI) NM_001282175 (RefSeq)
mouse	Clptm1	MGI:1927155 (MGI) 56457 (Entrez Gene) Gene Tree Clptm1 (Alliance of Genome Resources)	Chr7 9.93 cM	Chr7:19365505-19398955 (-) GRCm39		56457 (NCBI Gene Model) Q8VBZ3 (UniProt | EBI) NM_019649 (RefSeq)
rat	Clptm1	RGD:1310959 (Rat Genome Database) 292696 (Entrez Gene) Clptm1 (Alliance of Genome Resources)	Chr1 q21			NP_001099702 (RefSeq) NM_001106232 (RefSeq)
zebrafish	clptm1	ZDB-GENE-040801-265 (Zebrafish Model Organism Database) 795480 (Entrez Gene) clptm1 (Alliance of Genome Resources)	Chr15			Q6DEL2 (UniProt | EBI) NM_001003647 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.