Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	ATG16L1	HGNC:21498 (HGNC) 55054 (Entrez Gene) 610767 (OMIM) ATG16L1 (Alliance of Genome Resources)	Chr2 q37.1	Chr2:233210051-233295674 (+) GRCh38	inflammatory bowel disease 10	Q676U5 (UniProt | EBI) NM_001363742 (RefSeq)
mouse	Atg16l1	MGI:1924290 (MGI) 77040 (Entrez Gene) Gene Tree Atg16l1 (Alliance of Genome Resources)	Chr1 44.44 cM	Chr1:87683730-87720150 (+) GRCm39	inflammatory bowel disease 10	77040 (NCBI Gene Model) Q8C0J2 (UniProt | EBI) NM_001205391 (RefSeq)
rat	Atg16l1	RGD:1310631 (Rat Genome Database) 363278 (Entrez Gene) Atg16l1 (Alliance of Genome Resources)	Chr9 q35			NP_001102279 (RefSeq) NM_001108809 (RefSeq)
zebrafish	atg16l1	ZDB-GENE-050417-401 (Zebrafish Model Organism Database) 550552 (Entrez Gene) atg16l1 (Alliance of Genome Resources)	Chr15			NP_001017854 (RefSeq) NM_001017854 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.