Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RAET1G	HGNC:16795 (HGNC) 353091 (Entrez Gene) 609244 (OMIM) RAET1G (Alliance of Genome Resources)	Chr6 q25.1	Chr6:149916878-149923121 (-) GRCh38		Q6H3X3 (UniProt | EBI) NM_001001788 (RefSeq)
	RAET1L	HGNC:16798 (HGNC) 154064 (Entrez Gene) 611047 (OMIM) RAET1L (Alliance of Genome Resources)	Chr6 q25.1	Chr6:150018334-150025532 (-) GRCh38		Q5VY80 (UniProt | EBI) NM_130900 (RefSeq)
	ULBP2	HGNC:14894 (HGNC) 80328 (Entrez Gene) 605698 (OMIM) ULBP2 (Alliance of Genome Resources)	Chr6 q25.1	Chr6:149942014-149949235 (+) GRCh38		Q9BZM5 (UniProt | EBI) NM_025217 (RefSeq)
mouse	Raet1d	MGI:1861032 (MGI) 56554 (Entrez Gene) Gene Tree Raet1d (Alliance of Genome Resources)	Chr10 10.02 cM	Chr10:22236451-22250038 (+) GRCm39		ENSMUSG00000078452 (Ensembl Gene Model) ENSMUSP00000093471 (Ensembl) ENSMUST00000095795 (Ensembl)
rat	Raet1e	RGD:1311118 (Rat Genome Database) 292450 (Entrez Gene) Raet1e (Alliance of Genome Resources)	Chr1 p13			XP_006227662 (RefSeq)
	Raet1l	RGD:1308785 (Rat Genome Database) 292461 (Entrez Gene) Raet1l (Alliance of Genome Resources)	Chr1			NP_001013081 (RefSeq) NM_001013063 (RefSeq)
zebrafish	mhc1laa	ZDB-GENE-050417-464 (Zebrafish Model Organism Database) 550603 (Entrez Gene) mhc1laa (Alliance of Genome Resources)	Chr8			NP_001017904 (RefSeq) NM_001017904 (RefSeq)
	mhc1lba	ZDB-GENE-140820-3 (Zebrafish Model Organism Database) 100150607 (Entrez Gene) mhc1lba (Alliance of Genome Resources)	Chr8			XP_009302506 (RefSeq)
	mhc1lca	ZDB-GENE-140820-4 (Zebrafish Model Organism Database) 100000140 (Entrez Gene) mhc1lca (Alliance of Genome Resources)	Chr3			XP_001340413 (RefSeq)
	mhc1lga	ZDB-GENE-140820-8 (Zebrafish Model Organism Database) 100535946 (Entrez Gene) mhc1lga (Alliance of Genome Resources)	Chr25			NP_001314813 (RefSeq) NM_001327884 (RefSeq)
	mhc1lla	ZDB-GENE-140820-13 (Zebrafish Model Organism Database) 100536492 (Entrez Gene) mhc1lla (Alliance of Genome Resources)	Chr25			NP_001314818 (RefSeq) NM_001327889 (RefSeq)
	si:dkey-52p2.5	ZDB-GENE-161101-1 (Zebrafish Model Organism Database) 100334758 (Entrez Gene) si:dkey-52p2.5 (Alliance of Genome Resources)	Chr25			NP_001314816 (RefSeq) NM_001327887 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.