Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Vmn1r231	MGI:2159628 (MGI) 171230 (Entrez Gene) Gene Tree Vmn1r231 (Alliance of Genome Resources)	Chr17 11.4 cM	Chr17:21109978-21110913 (-) GRCm39		171230 (NCBI Gene Model) NP_598957 (RefSeq) NM_134196 (RefSeq)
rat	Vom1r10	RGD:1359612 (Rat Genome Database) 494302 (Entrez Gene) Vom1r10 (Alliance of Genome Resources)	Chr1 q12			NP_001008958 (RefSeq) NM_001008958 (RefSeq)
	Vom1r12	RGD:1359512 (Rat Genome Database) 494306 (Entrez Gene) Vom1r12 (Alliance of Genome Resources)	Chr1 q12			XP_038952973 (RefSeq) NM_001008962 (RefSeq)
	Vom1r15	RGD:1359235 (Rat Genome Database) 494305 (Entrez Gene) Vom1r15 (Alliance of Genome Resources)	Chr1 q12			NP_001008960 (RefSeq) NM_001008960 (RefSeq)
zebrafish	ora1	ZDB-GENE-050510-2 (Zebrafish Model Organism Database) 553133 (Entrez Gene) ora1 (Alliance of Genome Resources)	Chr22			A0A0R4IM31 (UniProt | EBI) NM_001130668 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.