Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TAP1	HGNC:43 (HGNC) 6890 (Entrez Gene) 170260 (OMIM) TAP1 (Alliance of Genome Resources)	Chr6 p21.32	Chr6:32845209-32853816 (-) GRCh38	allergic disease ankylosing spondylitis asthma bronchiectasis cervical cancer diffuse scleroderma extrinsic allergic alveolitis MHC class I deficiency open-angle glaucoma psoriasis pulmonary tuberculosis reactive arthritis rhinitis schizophrenia type 1 diabetes mellitus	Q03518 (UniProt | EBI) NM_000593 (RefSeq)
mouse	Tap1	MGI:98483 (MGI) 21354 (Entrez Gene) Gene Tree Tap1 (Alliance of Genome Resources)	Chr17 17.98 cM	Chr17:34406530-34416199 (+) GRCm39		21354 (NCBI Gene Model) P21958 (UniProt | EBI) NM_013683 (RefSeq)
rat	Tap1	RGD:3817 (Rat Genome Database) 24811 (Entrez Gene) Tap1 (Alliance of Genome Resources)	Chr20 p12			P36370 (UniProt | EBI) NM_032055 (RefSeq)
zebrafish	tap1	ZDB-GENE-050517-43 (Zebrafish Model Organism Database) 100333043 (Entrez Gene) tap1 (Alliance of Genome Resources)	Chr16			XP_002665053 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.