Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTPRA	HGNC:9664 (HGNC) 5786 (Entrez Gene) 176884 (OMIM) PTPRA (Alliance of Genome Resources)	Chr20 p13	Chr20:2864184-3039076 (+) GRCh38		P18433 (UniProt | EBI) NM_001385317 (RefSeq)
mouse	Ptpra	MGI:97808 (MGI) 19262 (Entrez Gene) Gene Tree Ptpra (Alliance of Genome Resources)	Chr2 63.23 cM	Chr2:130292198-130396220 (+) GRCm39		19262 (NCBI Gene Model) P18052 (UniProt | EBI) NM_008980 (RefSeq)
rat	Ptpra	RGD:3450 (Rat Genome Database) 25167 (Entrez Gene) Ptpra (Alliance of Genome Resources)	Chr3 q36			Q03348 (UniProt | EBI) NM_012763 (RefSeq)
zebrafish	ptpra	ZDB-GENE-020107-1 (Zebrafish Model Organism Database) 140818 (Entrez Gene) ptpra (Alliance of Genome Resources)	Chr21			NP_571963 (RefSeq) NM_131888 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.