Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SNX1	HGNC:11172 (HGNC) 6642 (Entrez Gene) 601272 (OMIM) SNX1 (Alliance of Genome Resources)	Chr15 q22.31	Chr15:64094123-64146090 (+) GRCh38		Q13596 (UniProt | EBI) NM_003099 (RefSeq)
mouse	Snx1	MGI:1928395 (MGI) 56440 (Entrez Gene) Gene Tree Snx1 (Alliance of Genome Resources)	Chr9 35.71 cM	Chr9:65995409-66032168 (-) GRCm39		56440 (NCBI Gene Model) Q9WV80 (UniProt | EBI) NM_019727 (RefSeq)
rat	Snx1	RGD:68935 (Rat Genome Database) 84471 (Entrez Gene) Snx1 (Alliance of Genome Resources)	Chr8 q24			Q99N27 (UniProt | EBI) NM_053411 (RefSeq)
zebrafish	snx1a	ZDB-GENE-060302-3 (Zebrafish Model Organism Database) 337386 (Entrez Gene) snx1a (Alliance of Genome Resources)	Chr25			NP_001122143 (RefSeq) NM_001128671 (RefSeq)
	snx1b	ZDB-GENE-050913-82 (Zebrafish Model Organism Database) 619253 (Entrez Gene) snx1b (Alliance of Genome Resources)	ChrUN			NP_001028907 (RefSeq) NM_001033735 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.