Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HMBOX1	HGNC:26137 (HGNC) 79618 (Entrez Gene) 618610 (OMIM) HMBOX1 (Alliance of Genome Resources)	Chr8 p21.1-p12	Chr8:28890116-29064764 (+) GRCh38		Q6NT76 (UniProt | EBI) NM_001324394 (RefSeq)
mouse	Hmbox1	MGI:2445066 (MGI) 219150 (Entrez Gene) Gene Tree Hmbox1 (Alliance of Genome Resources)	Chr14 33.79 cM	Chr14:65049049-65187320 (-) GRCm39		ENSMUSG00000021972 (Ensembl Gene Model) ENSMUSP00000135372 (Ensembl) ENSMUST00000177326 (Ensembl)
rat	Hmbox1	RGD:1306787 (Rat Genome Database) 305968 (Entrez Gene) Hmbox1 (Alliance of Genome Resources)	Chr15 p12			NP_001414030 (RefSeq) NM_001427100 (RefSeq)
zebrafish	hmbox1a	ZDB-GENE-050913-89 (Zebrafish Model Organism Database) 571508 (Entrez Gene) hmbox1a (Alliance of Genome Resources)	Chr17			NP_001025435 (RefSeq) NM_001030264 (RefSeq)
	hmbox1b	ZDB-GENE-090908-4 (Zebrafish Model Organism Database) 100317353 (Entrez Gene) hmbox1b (Alliance of Genome Resources)	Chr20			XP_009299745 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.