Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IGLC2	HGNC:5856 (HGNC) 3538 (Entrez Gene) IGLC2 (Alliance of Genome Resources)	Chr22 q11.22	Chr22:22900976-22901437 (+) GRCh38		P0DOY2 (UniProt | EBI)
	IGLC3	HGNC:5857 (HGNC) 3539 (Entrez Gene) IGLC3 (Alliance of Genome Resources)	Chr22 q11.22	Chr22:22906342-22906803 (+) GRCh38		P0DOY3 (UniProt | EBI)
	IGLC6	HGNC:5860 (HGNC) 3542 (Entrez Gene) IGLC6 (Alliance of Genome Resources)	Chr22 q11.22	Chr22:22919535-22919858 (+) GRCh38		P0CF74 (UniProt | EBI)
mouse	Iglc4	MGI:3642936 (MGI) 404736 (Entrez Gene) Gene Tree Iglc4 (Alliance of Genome Resources)	Chr16 11.89 cM	Chr16:19013749-19014062 (-) GRCm39		404736 (NCBI Gene Model) A0A0G2JEK5 (UniProt | EBI)
rat	Iglc1	RGD:2319568 (Rat Genome Database) 100361706 (Entrez Gene) Iglc1 (Alliance of Genome Resources)	Chr11			XP_006248711 (RefSeq)
zebrafish	igic1s1	ZDB-GENE-051013-12 (Zebrafish Model Organism Database) 798043 (Entrez Gene) igic1s1 (Alliance of Genome Resources)	Chr24			XP_068073380 (RefSeq)
	igl3v5	ZDB-GENE-051013-3 (Zebrafish Model Organism Database) 100009618 (Entrez Gene) igl3v5 (Alliance of Genome Resources)	Chr24
	zgc:153659	ZDB-GENE-060825-311 (Zebrafish Model Organism Database) 751695 (Entrez Gene) zgc:153659 (Alliance of Genome Resources)	Chr24			NP_001038873 (RefSeq) NM_001045408 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.