Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IGKV6-21	HGNC:5836 (HGNC) 28906 (Entrez Gene) IGKV6-21 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89159751-89160366 (-) GRCh38		A0A0C4DH24 (UniProt | EBI)
	IGKV6D-21	HGNC:5837 (HGNC) 28870 (Entrez Gene) IGKV6D-21 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90021567-90022185 (+) GRCh38		A0A0A0MT36 (UniProt | EBI)
	IGKV6D-41	HGNC:5838 (HGNC) 28869 (Entrez Gene) IGKV6D-41 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90069662-90070240 (+) GRCh38		A0A0C4DH26 (UniProt | EBI)
mouse	Igkv5-39	MGI:2686255 (MGI) 620017 (Entrez Gene) Gene Tree Igkv5-39 (Alliance of Genome Resources)	Chr6 31.67 cM	Chr6:69877408-69877961 (-) GRCm39		620017 (NCBI Gene Model) Q65ZI1 (UniProt | EBI) U48716 (GenBank | ENA | DDBJ)
zebrafish	igl3v2	ZDB-GENE-060503-410 (Zebrafish Model Organism Database) 100534704 (Entrez Gene) igl3v2 (Alliance of Genome Resources)	Chr24
	igl4v8	ZDB-GENE-051013-6 (Zebrafish Model Organism Database) 101884895 (Entrez Gene) igl4v8 (Alliance of Genome Resources)	Chr25			XP_068073697 (RefSeq)
	igl4v9	ZDB-GENE-051013-8 (Zebrafish Model Organism Database) 619523 (Entrez Gene) igl4v9 (Alliance of Genome Resources)	Chr25
	igl4v10	ZDB-GENE-051013-5 (Zebrafish Model Organism Database) 619526 (Entrez Gene) igl4v10 (Alliance of Genome Resources)	Chr25

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.