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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IFIT1 HGNC:5407 (HGNC)
3434 (Entrez Gene)
147690 (OMIM)
IFIT1 (Alliance of Genome Resources)
Chr10 q23.31 Chr10:89392546-89406487 (+)
GRCh38
P09914 (UniProt | EBI)
NM_001270930 (RefSeq)
IFIT1B HGNC:23442 (HGNC)
439996 (Entrez Gene)
IFIT1B (Alliance of Genome Resources)
Chr10 q23.31 Chr10:89378056-89385205 (+)
GRCh38
Q5T764 (UniProt | EBI)
NM_001010987 (RefSeq)
mouse Ifit1 MGI:99450 (MGI)
15957 (Entrez Gene)
Gene Tree
Ifit1 (Alliance of Genome Resources)
Chr19 29.78 cM Chr19:34618289-34627409 (+)
GRCm39
15957 (NCBI Gene Model)
Q64282 (UniProt | EBI)
NM_008331 (RefSeq)
rat Ifit1 RGD:620599 (Rat Genome Database)
56824 (Entrez Gene)
Ifit1 (Alliance of Genome Resources)
Chr1 q53 NP_064481 (RefSeq)
NM_020096 (RefSeq)
zebrafish ifit8 ZDB-GENE-051127-17 (Zebrafish Model Organism Database)
641567 (Entrez Gene)
ifit8 (Alliance of Genome Resources)
Chr13 NP_001032654 (RefSeq)
NM_001037565 (RefSeq)
ifit9 ZDB-GENE-121214-233 (Zebrafish Model Organism Database)
567384 (Entrez Gene)
ifit9 (Alliance of Genome Resources)
Chr12 NP_001315640 (RefSeq)
NM_001328711 (RefSeq)
ifit10 ZDB-GENE-121214-248 (Zebrafish Model Organism Database)
567441 (Entrez Gene)
ifit10 (Alliance of Genome Resources)
Chr12 NP_001287801 (RefSeq)
NM_001300872 (RefSeq)
ifit11 ZDB-GENE-121214-302 (Zebrafish Model Organism Database)
100001239 (Entrez Gene)
ifit11 (Alliance of Genome Resources)
Chr12 NP_001177393 (RefSeq)
NM_001190464 (RefSeq)
ifit12 ZDB-GENE-120406-2 (Zebrafish Model Organism Database)
567504 (Entrez Gene)
ifit12 (Alliance of Genome Resources)
Chr12 NP_001177394 (RefSeq)
NM_001190465 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory