Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Iigp1c	MGI:3644953 (MGI) 240327 (Entrez Gene) Gene Tree Iigp1c (Alliance of Genome Resources)	Chr18 34.36 cM	Chr18:60345152-60380892 (+) GRCm39	metabolic dysfunction-associated steatotic liver disease	ENSMUSG00000073555 (Ensembl Gene Model) ENSMUSP00000031549 (Ensembl) ENSMUST00000031549 (Ensembl)
rat	Ifgga2l1	RGD:1359421 (Rat Genome Database) 307414 (Entrez Gene) Ifgga2l1 (Alliance of Genome Resources)	Chr18 q12.1			NP_001012353 (RefSeq) NM_001012353 (RefSeq)
	RGD1309362	RGD:1309362 (Rat Genome Database) 307415 (Entrez Gene) RGD1309362 (Alliance of Genome Resources)	Chr18 q12.1			NP_001020055 (RefSeq) NM_001429145 (RefSeq)
zebrafish	irgf1	ZDB-GENE-051212-5 (Zebrafish Model Organism Database) 100137101 (Entrez Gene) irgf1 (Alliance of Genome Resources)	Chr19			NP_001307352 (RefSeq) NM_001320423 (RefSeq)
	irgf3	ZDB-GENE-051212-6 (Zebrafish Model Organism Database) 797731 (Entrez Gene) irgf3 (Alliance of Genome Resources)	Chr19			XP_001338197 (RefSeq)
	si:ch73-171o20.1	ZDB-GENE-140106-80 (Zebrafish Model Organism Database) 563833 (Entrez Gene) si:ch73-171o20.1 (Alliance of Genome Resources)	Chr19			XP_017207834 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.