Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SPARCL1	HGNC:11220 (HGNC) 8404 (Entrez Gene) 606041 (OMIM) SPARCL1 (Alliance of Genome Resources)	Chr4 q22.1	Chr4:87473335-87531061 (-) GRCh38		Q14515 (UniProt | EBI) NM_001291976 (RefSeq)
mouse	Sparcl1	MGI:108110 (MGI) 13602 (Entrez Gene) Gene Tree Sparcl1 (Alliance of Genome Resources)	Chr5 50.55 cM	Chr5:104226977-104261599 (-) GRCm39		ENSMUSG00000029309 (Ensembl Gene Model) ENSMUSP00000031249 (Ensembl) ENSMUST00000031249 (Ensembl)
rat	Sparcl1	RGD:2531 (Rat Genome Database) 25434 (Entrez Gene) Sparcl1 (Alliance of Genome Resources)	Chr14 p22			P24054 (UniProt | EBI) NM_012946 (RefSeq)
zebrafish	sparcl1	ZDB-GENE-060130-6 (Zebrafish Model Organism Database) 567331 (Entrez Gene) sparcl1 (Alliance of Genome Resources)	Chr1			NP_001124077 (RefSeq) NM_001130605 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.