Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	USH1C	HGNC:12597 (HGNC) 10083 (Entrez Gene) 605242 (OMIM) USH1C (Alliance of Genome Resources)	Chr11 p15.1		autosomal recessive nonsyndromic deafness 18A Usher syndrome Usher syndrome type 1 Usher syndrome type 1C	Q9Y6N9 (UniProt | EBI) NM_153676 (RefSeq)
mouse	Ush1c	MGI:1919338 (MGI) 72088 (Entrez Gene) Gene Tree Ush1c (Alliance of Genome Resources)	Chr7 29.66 cM	Chr7:45844774-45887927 (-) GRCm39	autosomal recessive nonsyndromic deafness 18A Usher syndrome type 1C	ENSMUSG00000030838 (Ensembl Gene Model) ENSMUSP00000009667 (Ensembl) ENSMUST00000009667 (Ensembl)
rat	Ush1c	RGD:1303329 (Rat Genome Database) 308596 (Entrez Gene) Ush1c (Alliance of Genome Resources)	Chr1 q22			NP_997686 (RefSeq) NM_212521 (RefSeq)
zebrafish	ush1c	ZDB-GENE-060312-41 (Zebrafish Model Organism Database) 564412 (Entrez Gene) ush1c (Alliance of Genome Resources)	Chr25			NP_001035018 (RefSeq) NM_001039929 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.