Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRIM39	HGNC:10065 (HGNC) 56658 (Entrez Gene) 605700 (OMIM) TRIM39 (Alliance of Genome Resources)	Chr6 p22.1	Chr6:30326469-30343729 (+) GRCh38		Q9HCM9 (UniProt | EBI) NM_001369522 (RefSeq)
mouse	Trim39	MGI:1890659 (MGI) 79263 (Entrez Gene) Gene Tree Trim39 (Alliance of Genome Resources)	Chr17 19.01 cM	Chr17:36569764-36582896 (-) GRCm39		79263 (NCBI Gene Model) Q9ESN2 (UniProt | EBI) NM_024468 (RefSeq)
rat	Trim39	RGD:1303115 (Rat Genome Database) 309591 (Entrez Gene) Trim39 (Alliance of Genome Resources)	Chr20 p12			Q6MFZ5 (UniProt | EBI) NM_213562 (RefSeq)
zebrafish	btr04	ZDB-GENE-060825-109 (Zebrafish Model Organism Database) 565512 (Entrez Gene) btr04 (Alliance of Genome Resources)	Chr7			XP_017212468 (RefSeq) NM_001077168 (RefSeq)
	btr20	ZDB-GENE-060421-3419 (Zebrafish Model Organism Database) 678596 (Entrez Gene) btr20 (Alliance of Genome Resources)	Chr19			NP_001410635 (RefSeq) NM_001423706 (RefSeq)
	btr21	ZDB-GENE-081031-80 (Zebrafish Model Organism Database) 100330973 (Entrez Gene) btr21 (Alliance of Genome Resources)	Chr19
	btr25	ZDB-GENE-070705-377 (Zebrafish Model Organism Database) 571141 (Entrez Gene) btr25 (Alliance of Genome Resources)	Chr19			NP_001373741 (RefSeq) NM_001100041 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.