Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAPN13	HGNC:16663 (HGNC) 92291 (Entrez Gene) 610228 (OMIM) CAPN13 (Alliance of Genome Resources)	Chr	Chr2:30722771-30820542 (-) GRCh38		Q6MZZ7 (UniProt | EBI) NM_144575 (RefSeq)
mouse	Capn13	MGI:2685789 (MGI) 381122 (Entrez Gene) Gene Tree Capn13 (Alliance of Genome Resources)	Chr17 44.84 cM	Chr17:73613451-73706376 (-) GRCm39		381122 (NCBI Gene Model) Q3UW68 (UniProt | EBI) NM_001033444 (RefSeq)
rat	Capn13	RGD:1562682 (Rat Genome Database) 362701 (Entrez Gene) Capn13 (Alliance of Genome Resources)	Chr6 q14			Q5BK10 (UniProt | EBI) NM_001025133 (RefSeq)
zebrafish	zgc:136872	ZDB-GENE-060421-5204 (Zebrafish Model Organism Database) 678524 (Entrez Gene) zgc:136872 (Alliance of Genome Resources)	Chr17			NP_001035341 (RefSeq) NM_001040251 (RefSeq)
	zgc:162184	ZDB-GENE-070424-83 (Zebrafish Model Organism Database) 559822 (Entrez Gene) zgc:162184 (Alliance of Genome Resources)	Chr17			NP_001082852 (RefSeq) NM_001089383 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.