Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTPN23	HGNC:14406 (HGNC) 25930 (Entrez Gene) 606584 (OMIM) PTPN23 (Alliance of Genome Resources)	Chr3 p21.31	Chr3:47381011-47413435 (+) GRCh38		Q9H3S7 (UniProt | EBI) NM_001304482 (RefSeq)
mouse	Ptpn23	MGI:2144837 (MGI) 104831 (Entrez Gene) Gene Tree Ptpn23 (Alliance of Genome Resources)	Chr9 59.92 cM	Chr9:110214152-110237278 (-) GRCm39		104831 (NCBI Gene Model) Q6PB44 (UniProt | EBI) NM_001081043 (RefSeq)
rat	Ptpn23	RGD:619892 (Rat Genome Database) 117552 (Entrez Gene) Ptpn23 (Alliance of Genome Resources)	Chr8 q32			O88902 (UniProt | EBI) NM_057204 (RefSeq)
zebrafish	ptpn23a	ZDB-GENE-100921-24 (Zebrafish Model Organism Database) 100007322 (Entrez Gene) ptpn23a (Alliance of Genome Resources)	Chr16			NP_001189436 (RefSeq) NM_001202507 (RefSeq)
	ptpn23b	ZDB-GENE-060503-179 (Zebrafish Model Organism Database) 560417 (Entrez Gene) ptpn23b (Alliance of Genome Resources)	Chr19			NP_001038393 (RefSeq) NM_001044928 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.