Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CDH13	HGNC:1753 (HGNC) 1012 (Entrez Gene) 601364 (OMIM) CDH13 (Alliance of Genome Resources)	Chr16 q23.3	Chr16:82626965-83800640 (+) GRCh38	breast cancer breast carcinoma cervical cancer endometrial carcinoma lung non-small cell carcinoma ovarian cancer prostate cancer urinary bladder cancer	P55290 (UniProt | EBI) NM_001257 (RefSeq)
mouse	Cdh13	MGI:99551 (MGI) 12554 (Entrez Gene) Gene Tree Cdh13 (Alliance of Genome Resources)	Chr8 65.97 cM	Chr8:119010472-120051660 (+) GRCm39		ENSMUSG00000031841 (Ensembl Gene Model) ENSMUSP00000113527 (Ensembl) ENSMUST00000117160 (Ensembl)
rat	Cdh13	RGD:619745 (Rat Genome Database) 192248 (Entrez Gene) Cdh13 (Alliance of Genome Resources)	Chr19 q12			NP_620244 (RefSeq) NM_138889 (RefSeq)
zebrafish	cdh13	ZDB-GENE-060503-286 (Zebrafish Model Organism Database) 558732 (Entrez Gene) cdh13 (Alliance of Genome Resources)	Chr18			XP_068075001 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.