Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Cd200l2	MGI:5009947 (MGI) 100047671 (Entrez Gene) Gene Tree Cd200l2 (Alliance of Genome Resources)	Chr16 29.53 cM	Chr16:45332154-45352413 (-) GRCm39		ENSMUSG00000116542 (Ensembl Gene Model) ENSMUSP00000155928 (Ensembl) ENSMUST00000232600 (Ensembl)
rat	Cd200l1	RGD:1590201 (Rat Genome Database) 685767 (Entrez Gene) Cd200l1 (Alliance of Genome Resources)	Chr11 q21			XP_001065185 (RefSeq)
	Cd200l2	RGD:1590252 (Rat Genome Database) 685716 (Entrez Gene) Cd200l2 (Alliance of Genome Resources)	Chr11 q21			XP_038944639 (RefSeq)
zebrafish	si:dkey-31e10.1	ZDB-GENE-060503-356 (Zebrafish Model Organism Database) 794489 (Entrez Gene) si:dkey-31e10.1 (Alliance of Genome Resources)	Chr1			XP_021331642 (RefSeq)
	si:dkey-31e10.5	ZDB-GENE-121214-76 (Zebrafish Model Organism Database) 100536909 (Entrez Gene) si:dkey-31e10.5 (Alliance of Genome Resources)	Chr1			XP_003197671 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.