Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CSPG5	HGNC:2467 (HGNC) 10675 (Entrez Gene) 606775 (OMIM) CSPG5 (Alliance of Genome Resources)	Chr3 p21.31	Chr3:47562238-47580792 (-) GRCh38		O95196 (UniProt | EBI) NM_006574 (RefSeq)
mouse	Cspg5	MGI:1352747 (MGI) 29873 (Entrez Gene) Gene Tree Cspg5 (Alliance of Genome Resources)	Chr9 59.89 cM	Chr9:110072851-110091644 (+) GRCm39		29873 (NCBI Gene Model) Q71M36 (UniProt | EBI) NM_001166273 (RefSeq)
rat	Cspg5	RGD:2431 (Rat Genome Database) 50568 (Entrez Gene) Cspg5 (Alliance of Genome Resources)	Chr8 q32			Q9ERQ6 (UniProt | EBI) NM_019284 (RefSeq)
zebrafish	cspg5a	ZDB-GENE-080425-4 (Zebrafish Model Organism Database) 558206 (Entrez Gene) cspg5a (Alliance of Genome Resources)	Chr16			XP_009290875 (RefSeq)
	cspg5b	ZDB-GENE-060503-368 (Zebrafish Model Organism Database) 559358 (Entrez Gene) cspg5b (Alliance of Genome Resources)	Chr19			NP_001038357 (RefSeq) NM_001044892 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.