Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	GALNT12	HGNC:19877 (HGNC) 79695 (Entrez Gene) 610290 (OMIM) GALNT12 (Alliance of Genome Resources)	Chr9 q22.33	Chr9:98807670-98850081 (+) GRCh38	colorectal cancer	Q8IXK2 (UniProt | EBI) NM_024642 (RefSeq)
mouse	Galnt12	MGI:2444664 (MGI) 230145 (Entrez Gene) Gene Tree Galnt12 (Alliance of Genome Resources)	Chr4 25.96 cM	Chr4:47091909-47123070 (+) GRCm39		ENSMUSG00000039774 (Ensembl Gene Model) ENSMUSP00000045721 (Ensembl) ENSMUST00000045041 (Ensembl)
rat	Galnt12	RGD:1562001 (Rat Genome Database) 313233 (Entrez Gene) Galnt12 (Alliance of Genome Resources)	Chr5 q22			NP_001413928 (RefSeq) NM_001426999 (RefSeq)
zebrafish	galnt12	ZDB-GENE-060503-704 (Zebrafish Model Organism Database) 559736 (Entrez Gene) galnt12 (Alliance of Genome Resources)	Chr19			XP_688194 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.