Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STIM1	HGNC:11386 (HGNC) 6786 (Entrez Gene) 605921 (OMIM) STIM1 (Alliance of Genome Resources)	Chr11 p15.4	Chr11:3854527-4093210 (+) GRCh38	colorectal cancer gastrointestinal stromal tumor immunodeficiency 10 lung cancer Stormorken syndrome tubular aggregate myopathy 1	Q13586 (UniProt | EBI) NM_001382570 (RefSeq)
mouse	Stim1	MGI:107476 (MGI) 20866 (Entrez Gene) Gene Tree Stim1 (Alliance of Genome Resources)	Chr7 54.71 cM	Chr7:101917013-102086526 (+) GRCm39	Stormorken syndrome tubular aggregate myopathy 1	ENSMUSG00000030987 (Ensembl Gene Model) ENSMUSP00000147443 (Ensembl) ENSMUST00000209255 (Ensembl)
rat	Stim1	RGD:1306831 (Rat Genome Database) 361618 (Entrez Gene) Stim1 (Alliance of Genome Resources)	Chr1 q32			P84903 (UniProt | EBI) NM_001108496 (RefSeq)
zebrafish	stim1a	ZDB-GENE-060503-914 (Zebrafish Model Organism Database) 556360 (Entrez Gene) stim1a (Alliance of Genome Resources)	Chr15			NP_001038264 (RefSeq) NM_001044799 (RefSeq)
	stim1b	ZDB-GENE-060531-4 (Zebrafish Model Organism Database) 100005700 (Entrez Gene) stim1b (Alliance of Genome Resources)	Chr21			NP_001189470 (RefSeq) NM_001202541 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.