Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LRAT	HGNC:6685 (HGNC) 9227 (Entrez Gene) 604863 (OMIM) LRAT (Alliance of Genome Resources)	Chr4 q32.1	Chr4:154626945-154753120 (+) GRCh38	Leber congenital amaurosis 14 retinitis pigmentosa	O95237 (UniProt | EBI) NM_001301645 (RefSeq)
mouse	Lrat	MGI:1891259 (MGI) 79235 (Entrez Gene) Gene Tree Lrat (Alliance of Genome Resources)	Chr3 36.81 cM	Chr3:82799889-82811281 (-) GRCm39	Leber congenital amaurosis 14	79235 (NCBI Gene Model) Q9JI60 (UniProt | EBI) NM_023624 (RefSeq)
rat	Lrat	RGD:68362 (Rat Genome Database) 64047 (Entrez Gene) Lrat (Alliance of Genome Resources)	Chr2 q34			Q9JI61 (UniProt | EBI) NM_022280 (RefSeq)
zebrafish	lrata	ZDB-GENE-060720-1 (Zebrafish Model Organism Database) 553239 (Entrez Gene) lrata (Alliance of Genome Resources)	Chr1			NP_001191060 (RefSeq) NM_001204131 (RefSeq)
	lratb.1	ZDB-GENE-060810-31 (Zebrafish Model Organism Database) 553501 (Entrez Gene) lratb.1 (Alliance of Genome Resources)	Chr1			XP_021331631 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.