Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	POMT1	HGNC:9202 (HGNC) 10585 (Entrez Gene) 607423 (OMIM) POMT1 (Alliance of Genome Resources)	Chr9 q34.13	Chr9:131502789-131523806 (+) GRCh38	autosomal recessive limb-girdle muscular dystrophy type 2K cardiomyopathy cleft lip congenital muscular dystrophy-dystroglycanopathy type A1 lissencephaly muscular dystrophy muscular dystrophy-dystroglycanopathy type B1 Walker-Warburg syndrome	Q9Y6A1 (UniProt | EBI) NM_001353195 (RefSeq)
mouse	Pomt1	MGI:2138994 (MGI) 99011 (Entrez Gene) Gene Tree Pomt1 (Alliance of Genome Resources)	Chr2 22.09 cM	Chr2:32126602-32145017 (+) GRCm39	muscular dystrophy-dystroglycanopathy type B1	ENSMUSG00000039254 (Ensembl Gene Model) ENSMUSP00000038722 (Ensembl) ENSMUST00000036473 (Ensembl)
rat	Pomt1	RGD:620078 (Rat Genome Database) 84430 (Entrez Gene) Pomt1 (Alliance of Genome Resources)	Chr3 p12			Q99PR0 (UniProt | EBI) NM_053406 (RefSeq)
zebrafish	pomt1	ZDB-GENE-060929-966 (Zebrafish Model Organism Database) 569769 (Entrez Gene) pomt1 (Alliance of Genome Resources)	Chr5			F1QF89 (UniProt | EBI) NM_001048067 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.