Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RAP1GAP2	HGNC:29176 (HGNC) 23108 (Entrez Gene) 618714 (OMIM) RAP1GAP2 (Alliance of Genome Resources)	Chr17 p13.3	Chr17:2755645-3037741 (+) GRCh38		Q684P5 (UniProt | EBI) NM_001411049 (RefSeq)
mouse	Rap1gap2	MGI:3028623 (MGI) 380711 (Entrez Gene) Gene Tree Rap1gap2 (Alliance of Genome Resources)	Chr11 45.76 cM	Chr11:74274182-74501741 (-) GRCm39		ENSMUSG00000038807 (Ensembl Gene Model) ENSMUSP00000158689 (Ensembl) ENSMUST00000238457 (Ensembl)
rat	Rap1gap2	RGD:1304590 (Rat Genome Database) 303298 (Entrez Gene) Rap1gap2 (Alliance of Genome Resources)	Chr10 q24			NP_001388583 (RefSeq) NM_001107019 (RefSeq)
zebrafish	rap1gap2a	ZDB-GENE-061013-179 (Zebrafish Model Organism Database) 561339 (Entrez Gene) rap1gap2a (Alliance of Genome Resources)	Chr15			NP_001313371 (RefSeq) NM_001077555 (RefSeq)
	rap1gap2b	ZDB-GENE-080722-11 (Zebrafish Model Organism Database) 100170821 (Entrez Gene) rap1gap2b (Alliance of Genome Resources)	Chr21			NP_001410628 (RefSeq) NM_001423699 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.