Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	GIMAP1	HGNC:23237 (HGNC) 170575 (Entrez Gene) 608084 (OMIM) GIMAP1 (Alliance of Genome Resources)	Chr7 q36.1	Chr7:150716606-150724284 (+) GRCh38		Q8WWP7 (UniProt | EBI) NM_130759 (RefSeq)
mouse	Gimap1	MGI:109368 (MGI) 16205 (Entrez Gene) Gene Tree Gimap1 (Alliance of Genome Resources)	Chr6 23.69 cM	Chr6:48715988-48720729 (+) GRCm39		ENSMUSG00000090019 (Ensembl Gene Model) ENSMUSP00000062108 (Ensembl) ENSMUST00000054368 (Ensembl)
zebrafish	si:ch211-113e8.5	ZDB-GENE-090312-189 (Zebrafish Model Organism Database) 100307103 (Entrez Gene) si:ch211-113e8.5 (Alliance of Genome Resources)	Chr1			NP_001315496 (RefSeq) NM_001328567 (RefSeq)
	si:ch211-254c8.3	ZDB-GENE-100922-130 (Zebrafish Model Organism Database) 100006139 (Entrez Gene) si:ch211-254c8.3 (Alliance of Genome Resources)	Chr3			XP_021327463 (RefSeq)
	si:dkey-30g5.1	ZDB-GENE-091116-100 (Zebrafish Model Organism Database) 791501 (Entrez Gene) si:dkey-30g5.1 (Alliance of Genome Resources)	Chr3			XP_009290812 (RefSeq)
	zgc:153642	ZDB-GENE-061013-527 (Zebrafish Model Organism Database) 768150 (Entrez Gene) zgc:153642 (Alliance of Genome Resources)	Chr1			NP_001070761 (RefSeq) NM_001077293 (RefSeq)
	zgc:171452	ZDB-GENE-071004-84 (Zebrafish Model Organism Database) 100126110 (Entrez Gene) zgc:171452 (Alliance of Genome Resources)	Chr1			NP_001103308 (RefSeq) NM_001109838 (RefSeq)
	zgc:172091	ZDB-GENE-080204-41 (Zebrafish Model Organism Database) 100136869 (Entrez Gene) zgc:172091 (Alliance of Genome Resources)	Chr1			NP_001108059 (RefSeq) NM_001114587 (RefSeq)
	zgc:172131	ZDB-GENE-080204-47 (Zebrafish Model Organism Database) 100002821 (Entrez Gene) zgc:172131 (Alliance of Genome Resources)	Chr10			NP_001103883 (RefSeq) NM_001110413 (RefSeq)
	zgc:194443	ZDB-GENE-080723-6 (Zebrafish Model Organism Database) 100170776 (Entrez Gene) zgc:194443 (Alliance of Genome Resources)	Chr1			NP_001124087 (RefSeq) NM_001130615 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.