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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human H3C10 HGNC:4775 (HGNC)
8357 (Entrez Gene)
602818 (OMIM)
H3C10 (Alliance of Genome Resources)
Chr6 p22.1 Chr6:27810051-27811300 (+)
GRCh38
P68431 (UniProt | EBI)
NM_003536 (RefSeq)
H3C13 HGNC:25311 (HGNC)
653604 (Entrez Gene)
H3C13 (Alliance of Genome Resources)
Chr1 q21.2 Chr1:149813225-149813693 (-)
GRCh38
Q71DI3 (UniProt | EBI)
NM_001123375 (RefSeq)
H3C14 HGNC:20503 (HGNC)
126961 (Entrez Gene)
142780 (OMIM)
H3C14 (Alliance of Genome Resources)
Chr1 q21.2 Q71DI3 (UniProt | EBI)
NM_021059 (RefSeq)
H3C15 HGNC:20505 (HGNC)
333932 (Entrez Gene)
H3C15 (Alliance of Genome Resources)
Chr1 q21.2 Chr1:149852608-149853125 (+)
GRCh38
Q71DI3 (UniProt | EBI)
NM_001005464 (RefSeq)
mouse H3c2 MGI:2448319 (MGI)
319150 (Entrez Gene)
Gene Tree
H3c2 (Alliance of Genome Resources)
Chr13 9.91 cM Chr13:23936328-23936823 (+)
GRCm39
319150 (NCBI Gene Model)
P84228 (UniProt | EBI)
NM_178203 (RefSeq)
rat H3c13 RGD:1586732 (Rat Genome Database)
684762 (Entrez Gene)
H3c13 (Alliance of Genome Resources)
Chr17 NP_001395612 (RefSeq)
NM_001408683 (RefSeq)
H3cl RGD:7709329 (Rat Genome Database)
102549173 (Entrez Gene)
H3cl (Alliance of Genome Resources)
Chr17
H4cl1 RGD:7725170 (Rat Genome Database)
102548682 (Entrez Gene)
H4cl1 (Alliance of Genome Resources)
Chr17 XP_017456208 (RefSeq)
Hist2h3c2 RGD:1306445 (Rat Genome Database)
310678 (Entrez Gene)
Hist2h3c2 (Alliance of Genome Resources)
Chr2 q34 NP_001101168 (RefSeq)
NM_001107698 (RefSeq)
zebrafish h3c13a ZDB-GENE-050626-58 (Zebrafish Model Organism Database)
573992 (Entrez Gene)
h3c13a (Alliance of Genome Resources)
Chr25 Q4QRF4 (UniProt | EBI)
NM_001025171 (RefSeq)
hist2h3c ZDB-GENE-070424-8 (Zebrafish Model Organism Database)
570618 (Entrez Gene)
hist2h3c (Alliance of Genome Resources)
Chr25 NP_001093643 (RefSeq)
NM_001100173 (RefSeq)
si:ch73-36p18.2 ZDB-GENE-131127-56 (Zebrafish Model Organism Database)
100334933 (Entrez Gene)
si:ch73-36p18.2 (Alliance of Genome Resources)
Chr25 XP_002666951 (RefSeq)
si:dkey-108k21.25 ZDB-GENE-131121-61 (Zebrafish Model Organism Database)
103909883 (Entrez Gene)
si:dkey-108k21.25 (Alliance of Genome Resources)
Chr25 XP_009296462 (RefSeq)
si:dkey-261m9.8 ZDB-GENE-131127-42 (Zebrafish Model Organism Database)
100329422 (Entrez Gene)
si:dkey-261m9.8 (Alliance of Genome Resources)
Chr25 XP_017209710 (RefSeq)
zgc:162611 ZDB-GENE-070410-87 (Zebrafish Model Organism Database)
100037365 (Entrez Gene)
zgc:162611 (Alliance of Genome Resources)
Chr25 NP_001082986 (RefSeq)
NM_001089517 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory