Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	MMP17	HGNC:7163 (HGNC) 4326 (Entrez Gene) 602285 (OMIM) MMP17 (Alliance of Genome Resources)	Chr12 q24.33	Chr12:131828393-131851783 (+) GRCh38		Q9ULZ9 (UniProt | EBI) NM_001411000 (RefSeq)
mouse	Mmp17	MGI:1346076 (MGI) 23948 (Entrez Gene) Gene Tree Mmp17 (Alliance of Genome Resources)	Chr5 68.18 cM	Chr5:129661233-129688163 (+) GRCm39		ENSMUSG00000029436 (Ensembl Gene Model) ENSMUSP00000031390 (Ensembl) ENSMUST00000031390 (Ensembl)
rat	Mmp17	RGD:1311541 (Rat Genome Database) 288626 (Entrez Gene) Mmp17 (Alliance of Genome Resources)	Chr12 q13			NP_001099395 (RefSeq) NM_001105925 (RefSeq)
zebrafish	mmp17a	ZDB-GENE-070820-2 (Zebrafish Model Organism Database) 570076 (Entrez Gene) mmp17a (Alliance of Genome Resources)	Chr21			XP_698601 (RefSeq)
	mmp17b	ZDB-GENE-081107-17 (Zebrafish Model Organism Database) 100322027 (Entrez Gene) mmp17b (Alliance of Genome Resources)	Chr14			NP_001352432 (RefSeq) NM_001365503 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.