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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GBP1 HGNC:4182 (HGNC)
2633 (Entrez Gene)
600411 (OMIM)
GBP1 (Alliance of Genome Resources)
Chr1 p22.2 Chr1:89051882-89065360 (-)
GRCh38
P32455 (UniProt | EBI)
NM_002053 (RefSeq)
GBP2 HGNC:4183 (HGNC)
2634 (Entrez Gene)
600412 (OMIM)
GBP2 (Alliance of Genome Resources)
Chr1 p22.2 Chr1:89106132-89150456 (-)
GRCh38
P32456 (UniProt | EBI)
NM_004120 (RefSeq)
GBP3 HGNC:4184 (HGNC)
2635 (Entrez Gene)
600413 (OMIM)
GBP3 (Alliance of Genome Resources)
Chr1 p22.2 Chr1:89006679-89022894 (-)
GRCh38
Q9H0R5 (UniProt | EBI)
NM_018284 (RefSeq)
mouse Gbp2b MGI:95666 (MGI)
14468 (Entrez Gene)
Gene Tree
Gbp2b (Alliance of Genome Resources)
Chr3 66.69 cM Chr3:142300608-142324940 (+)
GRCm39
ENSMUSG00000040264 (Ensembl Gene Model)
ENSMUSP00000029936 (Ensembl)
ENSMUST00000029936 (Ensembl)
rat Gbp2 RGD:621810 (Rat Genome Database)
171164 (Entrez Gene)
Gbp2 (Alliance of Genome Resources)
Chr2 q44 Q63663 (UniProt | EBI)
NM_133624 (RefSeq)
zebrafish gbp2 ZDB-GENE-070912-618 (Zebrafish Model Organism Database)
570622 (Entrez Gene)
gbp2 (Alliance of Genome Resources)
Chr2 XP_699217 (RefSeq)
gbp3 ZDB-GENE-070912-176 (Zebrafish Model Organism Database)
563072 (Entrez Gene)
gbp3 (Alliance of Genome Resources)
Chr2 NP_001410166 (RefSeq)
NM_001423237 (RefSeq)
unm_sa911 ZDB-GENE-120727-3 (Zebrafish Model Organism Database)
100334992 (Entrez Gene)
unm_sa911 (Alliance of Genome Resources)
Chr17 XP_021323188 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory