Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRDM2	HGNC:9347 (HGNC) 7799 (Entrez Gene) 601196 (OMIM) PRDM2 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13700188-13825079 (+) GRCh38		Q13029 (UniProt | EBI) NM_001393988 (RefSeq)
mouse	Prdm2	MGI:107628 (MGI) 110593 (Entrez Gene) Gene Tree Prdm2 (Alliance of Genome Resources)	Chr4 76.84 cM	Chr4:142833961-142939560 (-) GRCm39		110593 (NCBI Gene Model) NP_001074824 (RefSeq) NM_001256380 (RefSeq)
rat	Prdm2	RGD:1594531 (Rat Genome Database) 313678 (Entrez Gene) Prdm2 (Alliance of Genome Resources)	Chr5 q36			Q63755 (UniProt | EBI) NM_001077648 (RefSeq)
zebrafish	prdm2a	ZDB-GENE-081104-139 (Zebrafish Model Organism Database) 100003615 (Entrez Gene) prdm2a (Alliance of Genome Resources)	Chr8			XP_001343122 (RefSeq)
	prdm2b	ZDB-GENE-080613-3 (Zebrafish Model Organism Database) 797296 (Entrez Gene) prdm2b (Alliance of Genome Resources)	Chr11			XP_002663834 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.