Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CNTN3	HGNC:2173 (HGNC) 5067 (Entrez Gene) 601325 (OMIM) CNTN3 (Alliance of Genome Resources)	Chr3 p12.3	Chr3:74262568-74614659 (-) GRCh38		Q9P232 (UniProt | EBI) NM_020872 (RefSeq)
mouse	Cntn3	MGI:99534 (MGI) 18488 (Entrez Gene) Gene Tree Cntn3 (Alliance of Genome Resources)	Chr6 47.52 cM	Chr6:102140265-102541575 (-) GRCm39		18488 (NCBI Gene Model) Q07409 (UniProt | EBI) NM_008779 (RefSeq)
rat	Cntn3	RGD:3253 (Rat Genome Database) 54279 (Entrez Gene) Cntn3 (Alliance of Genome Resources)	Chr4 q34-q41			Q62682 (UniProt | EBI) NM_019329 (RefSeq)
zebrafish	cntn3a.1	ZDB-GENE-081030-10 (Zebrafish Model Organism Database) 569437 (Entrez Gene) cntn3a.1 (Alliance of Genome Resources)	Chr23			XP_697914 (RefSeq)
	cntn3a.2	ZDB-GENE-090312-57 (Zebrafish Model Organism Database) 100000688 (Entrez Gene) cntn3a.2 (Alliance of Genome Resources)	Chr23			XP_001340839 (RefSeq)
	cntn3b	ZDB-GENE-130530-645 (Zebrafish Model Organism Database) 556251 (Entrez Gene) cntn3b (Alliance of Genome Resources)	Chr6			XP_684096 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.