Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	NKX3-1	HGNC:7838 (HGNC) 4824 (Entrez Gene) 602041 (OMIM) NKX3-1 (Alliance of Genome Resources)	Chr8 p21.2	Chr8:23678693-23682938 (-) GRCh38	hepatocellular carcinoma	Q99801 (UniProt | EBI) NM_001256339 (RefSeq)
mouse	Nkx3-1	MGI:97352 (MGI) 18095 (Entrez Gene) Gene Tree Nkx3-1 (Alliance of Genome Resources)	Chr14 36.02 cM	Chr14:69428141-69432107 (+) GRCm39	prostate cancer	18095 (NCBI Gene Model) P97436 (UniProt | EBI) NM_010921 (RefSeq)
rat	Nkx3-1	RGD:1305369 (Rat Genome Database) 305999 (Entrez Gene) Nkx3-1 (Alliance of Genome Resources)	Chr15 p11			NP_001029316 (RefSeq) NM_001034144 (RefSeq)
zebrafish	nkx3-1	ZDB-GENE-081104-238 (Zebrafish Model Organism Database) 555375 (Entrez Gene) nkx3-1 (Alliance of Genome Resources)	Chr8			NP_001373254 (RefSeq) NM_001386325 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.