Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	COL4A1	HGNC:2202 (HGNC) 1282 (Entrez Gene) 120130 (OMIM) COL4A1 (Alliance of Genome Resources)	Chr13 q34	Chr13:110148963-110307202 (-) GRCh38	brain small vessel disease 1 myocardial infarction retinal arterial tortuosity uterine fibroid	P02462 (UniProt | EBI) NM_001303110 (RefSeq)
mouse	Col4a1	MGI:88454 (MGI) 12826 (Entrez Gene) Gene Tree Col4a1 (Alliance of Genome Resources)	Chr8 5.53 cM	Chr8:11248423-11362826 (-) GRCm39	brain small vessel disease 1 kidney disease porencephaly Walker-Warburg syndrome	ENSMUSG00000031502 (Ensembl Gene Model) ENSMUSP00000033898 (Ensembl) ENSMUST00000033898 (Ensembl)
rat	Col4a1	RGD:1307148 (Rat Genome Database) 290905 (Entrez Gene) Col4a1 (Alliance of Genome Resources)	Chr16 q12.5			NP_001128481 (RefSeq) NM_001135009 (RefSeq)
zebrafish	col4a1	ZDB-GENE-081105-114 (Zebrafish Model Organism Database) 554269 (Entrez Gene) col4a1 (Alliance of Genome Resources)	Chr9			XP_694040 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.