Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CHL1	HGNC:1939 (HGNC) 10752 (Entrez Gene) 607416 (OMIM) CHL1 (Alliance of Genome Resources)	Chr3 p26.3	Chr3:196763-409417 (+) GRCh38	schizophrenia	O00533 (UniProt | EBI) NM_001253388 (RefSeq)
mouse	Chl1	MGI:1098266 (MGI) 12661 (Entrez Gene) Gene Tree Chl1 (Alliance of Genome Resources)	Chr6 47.97 cM	Chr6:103487372-103709999 (+) GRCm39		12661 (NCBI Gene Model) P70232 (UniProt | EBI) NM_007697 (RefSeq)
rat	Chl1	RGD:620122 (Rat Genome Database) 89828 (Entrez Gene) Chl1 (Alliance of Genome Resources)	Chr4			NP_001414037 (RefSeq) NM_001427108 (RefSeq)
zebrafish	chl1a	ZDB-GENE-090313-201 (Zebrafish Model Organism Database) 566148 (Entrez Gene) chl1a (Alliance of Genome Resources)	Chr23			NP_001156578 (RefSeq) NM_001163106 (RefSeq)
	chl1b	ZDB-GENE-091105-1 (Zebrafish Model Organism Database) 100318566 (Entrez Gene) chl1b (Alliance of Genome Resources)	Chr6			XP_068078146 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.