Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	AGTPBP1	HGNC:17258 (HGNC) 23287 (Entrez Gene) 606830 (OMIM) AGTPBP1 (Alliance of Genome Resources)	Chr9 q21.33	Chr9:85546539-85805483 (-) GRCh38		Q9UPW5 (UniProt | EBI) NM_001286717 (RefSeq)
mouse	Agtpbp1	MGI:2159437 (MGI) 67269 (Entrez Gene) Gene Tree Agtpbp1 (Alliance of Genome Resources)	Chr13 Syntenic	Chr13:59597348-59705184 (-) GRCm39	retinitis pigmentosa	67269 (NCBI Gene Model) Q641K1 (UniProt | EBI) NM_001284221 (RefSeq)
rat	Agtpbp1	RGD:1306307 (Rat Genome Database) 290986 (Entrez Gene) Agtpbp1 (Alliance of Genome Resources)	Chr17 p14			NP_001099570 (RefSeq) NM_001106100 (RefSeq)
zebrafish	agtpbp1	ZDB-GENE-081104-267 (Zebrafish Model Organism Database) 554164 (Entrez Gene) agtpbp1 (Alliance of Genome Resources)	Chr8			Q4U2V3 (UniProt | EBI) NM_001024445 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.