Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCL21	HGNC:10620 (HGNC) 6366 (Entrez Gene) 602737 (OMIM) CCL21 (Alliance of Genome Resources)	Chr9 p13.3	Chr9:34709005-34710136 (-) GRCh38		O00585 (UniProt | EBI) NM_002989 (RefSeq)
mouse	Ccl21e	MGI:3711256 (MGI) 100504239 (Entrez Gene) Gene Tree Ccl21e (Alliance of Genome Resources)	Chr4 22.7 cM	Chr4:42612123-42613253 (+) GRCm39		100504239 (NCBI Gene Model) NP_001180597 (RefSeq) NM_001193668 (RefSeq)
rat	Ccl21	RGD:1311996 (Rat Genome Database) 298006 (Entrez Gene) Ccl21 (Alliance of Genome Resources)	Chr5 q22			NP_001008513 (RefSeq) NM_001008513 (RefSeq)
zebrafish	ccl25a	ZDB-GENE-110222-1 (Zebrafish Model Organism Database) 100333914 (Entrez Gene) ccl25a (Alliance of Genome Resources)	Chr2			XP_002661011 (RefSeq)
	ccl25b	ZDB-GENE-110222-2 (Zebrafish Model Organism Database) 795788 (Entrez Gene) ccl25b (Alliance of Genome Resources)	Chr11			NP_001186964 (RefSeq) NM_001200035 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.