Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SHROOM3	HGNC:30422 (HGNC) 57619 (Entrez Gene) 604570 (OMIM) SHROOM3 (Alliance of Genome Resources)	Chr4 q21.1	Chr4:76435229-76783253 (+) GRCh38		Q8TF72 (UniProt | EBI) NM_020859 (RefSeq)
mouse	Shroom3	MGI:1351655 (MGI) 27428 (Entrez Gene) Gene Tree Shroom3 (Alliance of Genome Resources)	Chr5 47.29 cM	Chr5:92831294-93113177 (+) GRCm39		ENSMUSG00000029381 (Ensembl Gene Model) ENSMUSP00000108678 (Ensembl) ENSMUST00000113055 (Ensembl)
rat	Shroom3	RGD:1310470 (Rat Genome Database) 305230 (Entrez Gene) Shroom3 (Alliance of Genome Resources)	Chr14 p22			NP_001094359 (RefSeq) NM_001100889 (RefSeq)
zebrafish	shroom3	ZDB-GENE-120817-1 (Zebrafish Model Organism Database) 101180909 (Entrez Gene) shroom3 (Alliance of Genome Resources)	Chr17			NP_001265780 (RefSeq) NM_001278851 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.